Publications:


Self-Assembling RNA Nanoparticle for Gene Expression Regulation in a Model System

Dominika Jedrzejczyk and Arkadiusz Chworos

ACS Synthetic Biol., 2019, 8(3), 491-497


Theoretical and experimental study on the electronic structure of distyrylnaphthalene-based conjugated oligoelectrolytes

Agnieszka Kowalska-Baron, Remigiusz Zurawinski, Beata Lukasik, Arkadiusz Chworos, Stanislaw Wysocki

J. Luminescence, 2018, 196, 81-89


Conjugate of PAMAM Dendrimer, Doxorubicin and Monoclonal Antibody-Trastuzumab: The New Approach of a Well-Known Strategy

Monika Marcinkowska, Ewelina Sobierajska, Maciej Stanczyk, Anna Janaszewska, Arkadiusz Chworos, Barbara Klajnert-Maculewicz

Polymers, 2018, 10(2), 187


Self-assembly nucleic acid-based biopolymers: learn from the nature

Pitchaya Pakornpadungsit, Wirasak Smitthipong, Arkadiusz Chworos

J. Pol. Res., 2018, 25(2), 45


Solvent effects on the photophysical properties of distyrylnaphthalene-based conjugated oligoelectrolytes

Agnieszka Kowalska-Baron, Remigiusz Zurawinski, Beata Lukasik, Arkadiusz Chworos, Stanislaw Wysocki

J. Luminescence, 2017, 192, 359-370


Composing RNA Nanostructures from a Syntax of RNA Structural Modules

Cody Geary, Arkadiusz Chworos, Erik Verzemnieks, Neil R. Voss, Luc Jaeger

Nano Lett., 2017, 17(11), 7095-7101


Facile synthesis of fluorescent distyrylnaphthalene derivatives for bioapplications

Beata Lukasik, Justyna Milczarek, Pawlowska Roza, Remigiusz Zurawinski, Arkadiusz Chworos

New J. Chemistry, 2017, 41(15), 6977-6980


Fluorescence and confocal imaging of mammalian cells using conjugated oligoelectrolytes with phenylenevinylene core

Justyna Milczarek, Roza Pawlowska, Remigiusz Zurawinski, Beata Lukasik, Logan E. Garner, Arkadiusz Chworos

J. Photochem. Photobiol. B, 2017, 170, 40-48


Designing synthetic RNA for delivery by nanoparticles

Dominika Jedrzejczyk, Edyta Gedaszewska-Darmach, Roza Pawlowska, Arkadiusz Chworos

J. Phys. Condens. Matter., 2017, 29(12), 123001


Supported Fluid Lipid Bilayer as a Scaffold to Direct Assembly of RNA Nanostructures

Aleksandra P. Dabkowska, Agnes Michanek, Luc Jaeger, Arkadiusz Chworos, Tommy Nylander, Emma Sparr

RNA structures: methods and protocol, Methods in Molecular Biology, 2017, 1632, 107-122


RNA model evaluation based on MD simulation of four tRNA analogs

Anna Grzybkowska, Dominika Jedrzejczyk, Rostkowski Michal, Arkadiusz Chworos, Agnieszka Dybala-Defratyka

RSC Adv., 2016, 104(6), 101778-101789


RNA fragments mimicking tRNA analogs interact with cytochrome c

Roza Pawlowska, Magdalena Janicka, Dominika Jedrzejczyk, Arkadiusz Chworos

Mol. Biol. Rep., 2016, 43(4), 295-304


The alpha-thio and/or beta-gamma-hypophosphate analogs of ATP as cofactors of T4 DNA ligase

Roza Pawlowska, Korczynski Dariusz, Barbara Nawrot, Wojciech J. Stec, Arkadiusz Chworos

Bioorg Chem., 2016, 110-5


Assembly of RNA nanostructures on supported lipid bilayers

Aleksandra P. Dabkowska, Agnes Michanek, Luc Jaeger, Michael Rabe, Arkadiusz Chworos, Fredrik Hook, Tommy Nylande, Emma Sparr

Nanoscale, 2015, 7(2), 583-596


Bio-inspired nucleic acids based materials

Arkadiusz Chworos and Wirasak Smitthipong

Bio-Based Composites for High-Performance Materials: From Strategy to Industrial Application

CRC Press, Taylor & Francis, 2015, chapter 2, 43-58


Phenylenevinylene conjugated oligoelectrolytes as fluorescent dyes for mammalian cell imaging

Paulina Gwozdzinska, Roza Pawlowska, Justyna Milczarek, Logan E. Garner, Alexander W. Thomas, Guillermo C. Bazan, Arkadiusz Chworos

Chemical Communications, 2014, 50 (94), 14859-14861


DNA-functionalized polystyrene particles and their controlled self-assembly

Rungsima Chollakup, Wirasak Smitthipong, Arkadiusz Chworos

RSC Advances, 2014, 4 (58), 30648-30653


Cytochrome c interaction with tRNA, the new properties of the known molecules

Roza Pawlowska, Dominika Jedrzejczyk, Magdalena Janicka, Anna Graczyk and Arkadiusz Chworos

Acta Biochimica Polonica, 2014, S1, P7.35, 155


Structural analogs of tRNA form a Complex with Cytochrome C

Roza Pawlowska, Dominika Jedrzejczyk, Magdalena Janicka, Arkadiusz Chworos

FEBS Letters 281, 2014, S1, 398


Anna Graczyk, Dominika Jedrzejczyk, Roza Pawlowska, Arkadiusz Chworos

The Complex of tRNA with Cytochrome C in Gel Studies

Collection Symposium Series, 2014, 14, 283-284


Rational design of RNA nanoparticles and nanoarrays

Arkadiusz Chworos

RNA Nanotechnology

Pan Stanford Publishing, 2014, chapter 11, 213-234


RNA nanoparticles for gene expression regulation

Roza Pawlowska, Paulina Gwozdzinska and Arkadiusz Chworos

Nucleic Acids Nanotechnologies in Medicine: Diagnosis and Treatment of Diseases

Springer, 2013, chapter 11, 263-290


Supramolecular cooperative-assembly of polyelectrolyte films

Rungsima Chollakup, Wirasak Smitthipong and Arkadiusz Chworos

RSC Advances, 2013, 3, 4745-4749


Distyrylbenzene oligoelectrolyte (DSBN+) for human cervical carcinoma cells imaging

Roza Pawlowska, Paulina Gwozdzinska, Logan Garner and Arkadiusz Chworos

MRS Symposium Proceedings, Cambridge University Press, 2013, vol. 1569


From Bioorganic Chemistry to Chemical Biology (Od chemii bioorganicznej do biologii chemicznej)

Wojciech T. Markiewicz, Henryk Koroniak, Arkadiusz Chworos, Piotr Mucha, Jan Barciszewski

Misja Nauk Chemicznych, Wydawnictwo Nauka I Innowacja, 2011, 27, 109-124 (book chapter)


Effect of the Peptide Secondary Structure on the Peptide Amphiphile Supramolecular Structure and Interactions

Dimitris Missirlis, Arkadiusz Chworos, Caroline J. Fu, Htet A. Khant, Daniel V. Krogstad, Matthew Tirrell

Langmuir, 2011, 27, 6163_6170


Self-Assembly of an Optically Active Conjugated Oligoelectrolyte

Julia H. Ortony, Tirtha Chatterjee, Logan E. Garner, Arkadiusz Chworos, Alexander Mikhailovsky, Edward J. Kramer Guillermo C. Bazan

JACS, 2011, 133, 8380-8387


Promoting RNA helical stacking via A-minor junctions

Cody Geary, Arkadiusz Chworos, Luc Jaeger

Nucleic Acids Research, 2011, 39(2), 1066-1080


Self-Assembling RNA Nanorings Based on RNAI/II Inverse Kissing Complexes

Wade W. Grabow, Paul Zakrevsky, Kirill Afonin, Arkadiusz Chworos, Bruce A. Shapiro, Luc Jaeger

Nano Lett., 2011, 11(2), 878-887


Improved isolation of proteins tagged with glutathione S-transferase

Nicholas K. Vinckier, Arkadiusz Chworos, Stanley M. Parsons

Protein Expression And Purification, 2011, 75(2), 161-164


A polyhedron made of tRNAs

Isil Severcan, Cody Geary, Arkadiusz Chworos, Neil Voss, Erica Jacovetty, Luc Jaeger

Nature Chemistry, 2010, 2, 772-779 (high impact)


Modification of the Optoelectronic Properties of Membranes via Insertion of Amphiphilic Phenylenevinylene Oligoelectrolytes

Logan E. Garner, Juhyun Park, Scott M. Dyar, Arkadiusz Chworos, James J. Sumner, Guillermo C. Bazan

JACS, 2010, 132 (29), 10042-10052


Identification of Bacteria by Conjugated Oligoelectrolyte/Single-Stranded DNA Electrostatic Complexes

Aidee Duarte, Arkadiusz Chworos, Suvi F. Flagan, Grady Hanrahan, Guillermo C. Bazan

JACS, 2010, 132 (36), 12562-12564


Specific interaction of DNA-functionalized polymer colloids

Rungsima Chollakup, Wirasak Smitthipong and Arkadiusz Chworos

Polymer Chemistry, 2010, 1 (5), 658-662


A Tripod Molecular Tip for Single Molecule Ligand-Receptor Force Spectroscopy by AFM

Michael E. Drew, Arkadiusz Chworos, Emin Oroudjev, Helen Hansma, Yoko Yamakoshi

Langmuir, 2010, 26 (10), 7117-7125


Automatic Analysis of Conjugated Polyelectrolytes - DNA Interactions Based on Sequential Analysis of AFM Imaging

Arkadiusz Chworos, Boguslaw Obara

IEEE Transactions on Nanotechnology, 8, 2009, 457-462


Noncovalent Supramolecular Self-assembling Polyelectrolyte: Nucleic Acid Based Materials

Wirasak Smitthipong, Thorsten Neumann, Surekha Gajria, Youli Li, Arkadiusz Chworos, Luc Jaeger, and Matthew Tirrell

Macromolecules, 2009, 10, 221-228


Square-Shaped RNA Particles from Different RNA Folds

Isil Severcan, Cody Geary, Erik Verzemnieks, Arkadiusz Chworos, and Luc Jaeger

Nano Letters, 2009, vol 9, issue 3, 1270-1277


Preliminary structural investigations of the Eut-L shell protein of the ethanolamine ammonia-lyase metabolosome of Escherichia coli

Kiel Nikolakakis, Akashi Ohtaki, Keith Newton, Arkadiusz Chworos and Martin Sagermann

Acta Crystallographica, 2009, F65, 128_132


Anatomy and Growth Characteristics of Conjugated Polyelectrolyte/DNA Aggregates.

Chunyan Chi, Arkadiusz Chworos, Jinping Zhang, Alexander Mikhailovsky and Guillermo C. Bazan

Advanced Functional Materials, 18, 2008, 3606_3612 (journal cover)


Self-assembled Materials Containing Complementary Nucleobase Molecular Recognition.

Wirasak Smitthipong, Arkadiusz Chworos, Brian Lin, Thorsten Neumann, Surekha Gajria, Luc Jaeger and Matthew Tirrell

Mater. Res. Soc. Symp. Proc., 2008, 1094


Supramolecular Materials Comprising Nucleic Acid Biopolymers.

Wirasak Smitthipong, Thorsten Neumann, Arkadiusz Chworos, Luc Jaeger and Matthew Tirrell

Macromol. Symp., 264, 2008, 13-17


Nucleic acid foldamers: design, engineering and selection of programmable bio-materials with recognition, catalytic and self-assembly properties.

Arkadiusz Chworos and Luc Jaeger

Foldamer, by Wiley, 2007, Chapter 10 (book chapter)


Sculpting Responsive, Informational Nano-Particles with RNA

Cody Geary, Isil Severcan, Erik Verzemnieks, Arkadiusz Chworos and Luc Jaeger

Journal of Biomolecular Structure & Dynamics, 2007, 24, 703-704


The design and characterization of modular polyhedral architectures made of RNA

Isil Severcan, Cody Geary, Arkadiusz Chworos, Luc Jaeger

Biophysical Journal, 2007, 350a-351a Suppl. S


The architectonics of programmable RNA and DNA nanostructures

Luc Jaeger and Arkadiusz Chworos

Current Opinion of Structural Biology, 2006, 4, 531-543 (review)


From RNA Tectonics to Programmable Jigsaw Puzzles Made of RNA

Arkadiusz Chworos and Luc Jaeger

Proceedings Foundations of Nanoscience, 2005, 157-162


Controlled Spacing of Cationic Gold Nanoparticles by Nanocrown RNA

Alexey Y. Koyfman, Gary Braun, Sergei Magonov, Arkadiusz Chworos, Norbert O. Reich, and Luc Jaeger

JACS, 2005, 127, 11886-11887


Thermal stability analysis of self-assembling tRNA tecto-squares

Isil Severcan, Arkadiusz Chworos, Luc Jaeger

Biophysical Journal, 2005,  88, 571a-571a Part 2 Suppl. S


Building Programmable Jigsaw Puzzles with RNA

Arkadiusz Chworos, Isil Severcan, Alexey Y. Koyfman, Patrick Weinkam, Emin Oroudjev, Helen G. Hansma and Luc Jaeger

Science, 2004, 306, 2068-72 (high impact)


Comparison of the cleavage profiles of oligonucleotide duplexes with or without phosphorothioate linkages by using a chemical nuclease probe

Arkadiusz Chworos, Philippe Arnaud , Krystyna Zakrzewska, Piotr Guga, Genevi�ve Pratviel, Wojciech J. Stec and Bernard Meunier

J Biol Inorg Chem., 2004, 9, 374-84


Characterization of the dehydro-guanidinohydantoin oxidation product of guanine in a dinucleotide

Arkadiusz Chworos, Christel Seguy, Genevi�ve Pratviel, and Bernard Meunier

Chem Res Toxicol., 2002, 15, 1643-51


New examples of mixed seleno-sulfides; reactions with triphenylphosphine

Arkadiusz Chworos, Lucyna A. Wozniak and Wojciech J. Stec

Chem Commun., 2002, 7, 518-9


Guanine oxidation: NMR charakterization of a dehydro-guanidinohydantoin residue generated by a 2e-oxidation of d(GpT)

Arkadiusz Chworos, Yannick Coppel, Igor Dubey, Genevieve Pratviel and Bernard Meunier

J.Am.Chem.Soc., 2001, 123, 5867-5877


One-Pot Synthesis of Nucleoside 3-O-(S-Phenyl Methanephosphonothioate)s

Jaroslaw Pyzowski, Arkadiusz Chworos, Lucyna A. Wozniak, Wojciech J. Stec

Tetrahedron Letters, 2000, 41, 1223-1226


Stereochemical Correlation and Absolute Configuration Assignment for Thymidine 3-(S-Phenyl Methanephosphonothioate)

Arkadiusz Chworos and Lucyna A. Wozniak

Proceedings of the VIth Int. Symp. Solid Phase Synthesis & Combinatorial Chemical Libraries York, UK. 1999, entitled _ Innovation and Perspectives in Solid Phase Synthesis & Combinatorial Libraries, 2000, 43-46


The Synthesis of Unsymmetrical S1-(3-O-Thymidine-O-Methanephosphonyl)-S2-p-Nitrophenyl Disulfides and Their Reactions with Triphenylphosphine

Arkadiusz Chworos, Lucyna A. Wozniak and Wojciech J. Stec

Tetrahedron Letters, 2000, 41, 1219-1222


A Facile Conversion of Thio- and Selenophosphoric Acids and Their Derivatives into Fluoridates by Means of Reaction with Silver Fluoride

Arkadiusz Chworos and Lucyna A. Wozniak

Tetrahedron Letters, 1999, 41, 9337-9340


Mixed Phosphorus-Carboxylic Anhydrides as Synthons for Stereoselective Synthesis of [Rp]-Dinucleoside (3,5)-Methanephosphonates

Lucyna A.Wozniak, Arkadiusz Chworos and Wojciech J. Stec

Phosphorus,Sulfur and Silicon; 146, 1999, 649-652


Chemo- and Stereoselectivity of Nucleophilic Substitution at Phosphorus in Mixed Phosphorus-Carboxylic Anhydrides

Lucyna A.Wozniak, Arkadiusz Chworos and Wojciech J. Stec

Phosphorus,Sulfur and Silicon, 1999, 147, 1263-1264


Stereoselective Synthesis of [Rp]-Dinucleoside (3,5)-Methanephosphonates

Lucyna A.Wozniak, Arkadiusz Chworos and Wojciech J. Stec

Phosphorus,Sulfur and Silicon, 1999, 147, 1265-1266


Base-Dependent Regioselective and P-stereocontrolled Hydrolysis of Nucleoside 3-O-(O-2,4,6,-trimethylbenzoyl methanephosphonothioate)s

Lucyna A.Wozniak, Jaroslaw Pyzowski, Arkadiusz Chworos and Wojciech J. Stec

J.Org.Chem., 1998, 63, 9109-9112



Patent Applications:


Methods of Synthesis P-chiralitys analogues of nucleotides

W.J. Stec, L.A. Wozniak, A. Chworos, J. Pyzowski

UP RP P-319677 25.04.1997


A Process for the Synthesis of Modified P-Chiral Nucleotide Analogs

W.J. Stec, L.A. Wozniak, A. Chworos, J. Pyzowski


European Patent: EP 0 977 769 B1 (Nov. 5, 1998)

World Wide Patent: WO 98/49179 (Nov. 5, 1998)

United States Patent: US 6,407,223 B1 (Jun. 18, 2002)